Contact Info
Kaori Yamada, PhD
ASSISTANT PROFESSOR OF PHARMACOLOGY
B.Sc., The University of Tokyo, Tokyo, Japan; Biology (1999).
M.S., The University of Tokyo, Tokyo, Japan; Biochemistry (2001).
PhD, The University of Tokyo, Tokyo, Japan; Biochemistry (2007).
Postdoc, University of Illinois at Chicago; Cell Biology (2009).
Research Interests
Regulation of the cell function via trafficking of signaling molecules
The important question in my research is how cellular function is dynamically regulated by local activation of cell signaling. To induce the signaling locally, the signaling molecules need to be accumulated at the particular area of the cells. The accumulation of the molecules is mediated by the intracellular trafficking by the molecular motors; kinesins, dyneins, and myosins. Among them, we are particularly interested in the kinesin family protein, KIF13B, as it transports important signaling molecules, such as VEGFR2.
Trafficking of VEGFR2 by KIF13B is critical for angiogenesis, the formation of the new blood vessels from pre-existing vessels. Angiogenesis is a hallmark of cancer and blinding eye diseases such as wet age-related macular degeneration (wet AMD) and diabetic retinopathy. Pathogenic angiogenesis is induced by an excess amount of vascular endothelial growth factor (VEGF) in the diseased tissue. To response to VEGF, VEGFR2 needs to be exposed at the cell surface of endothelial cells. We found that the trafficking of VEGFR2 to the cell surface is mediated by a kinesin motor KIF13B. Based on the finding, we developed a small peptide inhibitor disrupting the interaction between VEGFR2 and KIF13B, thus inhibiting VEGFR2 trafficking. This peptide inhibitor successfully inhibited pathological angiogenesis in wet AMD and cancer.
Live cell imaging of the directional movement of vesicles positive for VEGFR2-GFP (green) and mCherry-KIF13B (red) towards the cell periphery in endothelial cells.
Our projects focus on understanding the role of intracellular trafficking in the cell function, particularly dynamic cell sprouting in angiogenesis. Using live cell imaging of VEGFR2 in sprouting angiogenesis, we will tackle the interesting questions; how the trafficking is regulated, how the direction of the trafficking is decided, and what happens if the trafficking is activated or blocked. Moreover, using the mouse models of endothelial-specific KIF13B knockout and the aforementioned pharmacological inhibitor in disease models, such as cancer models, wet AMD models, and diabetic retinopathy models, we will address the role of the trafficking in progression of diseases, and whether we can develop the strategy to regulate the trafficking to inhibit pathological angiogenesis in these diseases.
Selected Publications
Yamada, K. H., Kang, H., Malik, A. B. Antiangiogenic Therapeutic Potential of Peptides Derived from the Molecular Motor KIF13B that Transports VEGFR2 to Plasmalemma in Endothelial Cells. Am J Pathol. 2017
Yamada, K. H., Nakajima, Y., Geyer, M., Wary, K. K., Ushio-Fukai, M., Komarova, Y., and Malik, A. B. KIF13B Regulates Angiogenesis through Golgi-Plasma Membrane Trafficking of VEGFR2. J. Cell Sci 2014.
Yamada, K.H., Kozlowski, D.A., Seidl, S.E., Lance, S., Wieschhaus, A.J., Sundivakkam, P., Tiruppathi, C., Chishti, I., Herman, I.M., Kuchay, S.M., Chishti, A.H. Targeted gene inactivation of calpain-1 suppresses cortical degeneration due to traumatic brain injury and neuronal apoptosis induced by oxidative stress. J. Biol. Chem. 2012
Tong, Y., Tempel, W., Wang, H., Yamada, K., Shen, L., Senisterra, G. A., MacKenzie, F., Chishti, A. H., Park, H. W. Phosphorylation-independent binding specificity of the KIF13-FHA domain mediates phosphoinositide transport. Proc. Nat. Acad. Sci. 2010
Yamada, K. H., Hanada, T., and Chishti, A. H. The effector domain of human Dlg tumor suppressor acts as a switch that relieves autoinhibition of kinesin-3 motor GAKIN/KIF13B. Biochemistry. 2007
Yamada, K. H., Hanada, T., and Chishti, A. H. Transport of PIP3 by GAKIN regulates axonal determination. Protein, Nucleic Acid, and Enzyme. 2007
Horiguchi, K., Hanada, T., Fukui, Y., and Chishti, A. H. Transport of PIP3 by GAKIN, a kinesin-3 family protein, regulates neuronal cell polarity. J Cell Biol. 2006
Tanaka, K., Horiguchi, K., Yoshida, T., Takeda, M., Fujisawa, H., Takeuchi, K., Umeda, M., Kato, S., Ihara, S., Nagata, S., and Fukui, Y. Evidence that a phosphatidylinositol 3,4,5-trisphosphate-binding protein can function in the nucleus. J Biol Chem. 1999